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  5. Msp_g37830

Msp_g37830


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g37830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.05 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04399 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60427 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119540.3.1 Solyc03g119540 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Spa_g04603 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47451 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005433_P002 Zm00001e005433 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.05 OrthoFinder output from all 47 species
Zm00001e030952_P002 Zm00001e030952 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 461 497
IPR000315 Znf_B-box 18 62
No external refs found!