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  5. Msp_g37577

Msp_g37577


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g37577

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00088770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT3G49910 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
AT5G67510 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Adi_g041472 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g33821 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ceric.25G058700.1 Ceric.25G058700 component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g26116 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os11g05370.1 LOC_Os11g05370 component RPL26 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os12g05430.1 LOC_Os12g05430 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Lfl_g06903 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Ore_g08095 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Sam_g12169 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Spa_g54872 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!