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  5. Msp_g35770

Msp_g35770


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g35770

Target Alias Description ECC score Gene Family Method Actions
AT2G45680 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g007407 AT-TCP20, TCP20,... circAdian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72040.t1 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010337 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-2394 0.05 OrthoFinder output from all 47 species
Ceric.02G017100.1 Ceric.02G017100 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Msp_g10117 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03168 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25970 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06765 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27780 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016510 No alias TCP-type transcription factor & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024570 No alias TCP-type transcription factor & original description: CDS=1-1014 0.03 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Spa_g50970 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 173 274
No external refs found!