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  5. Msp_g34402

Msp_g34402


Description : not classified & original description: none


Gene families : OG0002601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g34402
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Adi_g044399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19740.t1 Aspi01Gene19740 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007954 No alias not classified & original description: CDS=1-546 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007955 No alias not classified & original description: CDS=1-546 0.02 OrthoFinder output from all 47 species
Ceric.11G023500.1 Ceric.11G023500 not classified & original description: pacid=50596865... 0.02 OrthoFinder output from all 47 species
Ceric.11G024100.1 Ceric.11G024100 not classified & original description: pacid=50596638... 0.03 OrthoFinder output from all 47 species
Ceric.11G025800.1 Ceric.11G025800 not classified & original description: pacid=50595770... 0.03 OrthoFinder output from all 47 species
Dac_g40552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g42471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR008729 PA_de_COase 11 157
No external refs found!