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  5. Msp_g32349

Msp_g32349


Description : not classified & original description: none


Gene families : OG0000188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32349
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene06053.t1 Aspi01Gene06053 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21915.t1 Aspi01Gene21915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27892.t1 Aspi01Gene27892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g42777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!