Msp_g32035

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g32035
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AT3G26720	No alias	Glycosyl hydrolase family 38 protein	0.02	OrthoFinder output from all 47 species
Ehy_g12435	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g21570	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g23038	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01008642001	No alias	Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
MA_81598g0010	No alias	Probable alpha-mannosidase At5g66150 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004559	alpha-mannosidase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006013	mannose metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015923	mannosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041147	GH38_C	896	999
IPR000602	Glyco_hydro_38_N	44	355
IPR011682	Glyco_hydro_38_C	609	812
IPR015341	Glyco_hydro_38_cen	360	452

External Links

No external refs found!