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  5. Msp_g31558

Msp_g31558 (FPGS1, ATDFB, DFB)


Aliases : FPGS1, ATDFB, DFB

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0002558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002558_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31558
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT3G10160 FPGS2, ATDFC, DFC DHFS-FPGS homolog C 0.02 OrthoFinder output from all 47 species
Aob_g42406 FPGS1, ATDFB, DFB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Cre05.g239067 FPGS1, ATDFB, DFB Folylpolyglutamate synthase OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g25768 FPGS2, ATDFC, DFC EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g51429 FPGS1, ATDFB, DFB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016464001 FPGS1, ATDFB, DFB Coenzyme metabolism.tetrahydrofolate... 0.06 OrthoFinder output from all 47 species
Len_g16743 FPGS1, ATDFB, DFB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g36175 FPGS1, ATDFB, DFB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Smo431032 FPGS1, ATDFB, DFB Folylpolyglutamate synthase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!