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  5. Msp_g31090

Msp_g31090 (RGA, RGA1)


Aliases : RGA, RGA1

Description : transcription factor *(DELLA) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31090
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00148880 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Aev_g02589 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07498 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26688 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029812 RGL2 GRAS-type transcription factor & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Ehy_g07760 RGL2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45860.1 RGA2, GAI, LOC_Os01g45860 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49990.1 RGA2, GAI, LOC_Os03g49990 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49930.1 RGA2, GAI, LOC_Os05g49930 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Ore_g03173 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 287 659
IPR021914 TF_DELLA_N 25 91
No external refs found!