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  5. Msp_g29674

Msp_g29674 (STIP, HB-3, WOX9)


Aliases : STIP, HB-3, WOX9

Description : WOX-type transcription factor & original description: none


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29674
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G05770 WOX7 WUSCHEL related homeobox 7 0.03 OrthoFinder output from all 47 species
AT5G45980 STPL, WOX8 WUSCHEL related homeobox 8 0.04 OrthoFinder output from all 47 species
Ala_g32864 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22693 STPL, WOX8 WOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49578.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49881.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.19G009000.1 STIP, HB-3,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G023600.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G012000.1 WUS, PGA6, WUS1,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G042100.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g50892 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05491 WUS, PGA6, WUS1 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01018787001 WUS, PGA6, WUS1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62310.1 WOX2, LOC_Os01g62310 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os04g55590.1 WOX4, LOC_Os04g55590 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02730.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os08g14400.1 WOX12, LOC_Os08g14400 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_10234279g0010 STPL, WOX8 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_121643g0010 WOX4 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_129591g0010 No alias transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e028776_P002 WOX2, Zm00001e028776 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 229 289
No external refs found!