Msp_g28863


Description : not classified & original description: none


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28863
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00244570 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G03140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g081832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71697.t1 Aspi01Gene71697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G054600.1 Ceric.17G054600 not classified & original description: pacid=50617944... 0.04 OrthoFinder output from all 47 species
Dde_g25440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.04 OrthoFinder output from all 47 species
GSVIVT01024621001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036070001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_05036 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_35797 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46840.1 LOC_Os07g46840 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46860.1 LOC_Os07g46860 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46920.1 LOC_Os07g46920 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46970.1 LOC_Os07g46970 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46980.1 LOC_Os07g46980 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Len_g38241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48178 SRE1, SIS4,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_308546g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_8197627g0010 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.05 OrthoFinder output from all 47 species
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Nbi_g22148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016402 No alias not classified & original description: CDS=478-1323 0.03 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g17528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008253_P002 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!