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  5. Msp_g26639

Msp_g26639


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26639

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AT1G32700 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT3G60670 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT4G17900 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g03897 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46664 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23038 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47095.t2 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49362.t1 Aspi01Gene49362 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030564 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09518 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29417 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01013455001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Gb_01198 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Len_g57822 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11630 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37520 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g07250.1 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Ore_g08208 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07254 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0246.g026698 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Smo412053 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Solyc06g061240.4.1 Solyc06g061240 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc08g076860.3.1 Solyc08g076860 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023175_P001 Zm00001e023175 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 76 147
No external refs found!