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  5. Msp_g25972

Msp_g25972


Description : not classified & original description: none


Gene families : OG0000471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25972

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00228040 evm_27.TU.AmTr_v1... Uncharacterized protein At4g15970 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00206850 evm_27.TU.AmTr_v1... Uncharacterized protein At4g15970 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G28695 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 OrthoFinder output from all 47 species
AT1G28700 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 OrthoFinder output from all 47 species
AT1G28710 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 OrthoFinder output from all 47 species
AT4G15970 No alias Nucleotide-diphospho-sugar transferase family protein 0.03 OrthoFinder output from all 47 species
AT4G19970 No alias CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar... 0.02 OrthoFinder output from all 47 species
Aev_g34462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03644.t1 Aspi01Gene03644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03648.t1 Aspi01Gene03648 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G003500.1 Ceric.10G003500 not classified & original description: pacid=50613411... 0.02 OrthoFinder output from all 47 species
Dac_g02181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029389001 No alias Uncharacterized protein At4g15970 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g63270.1 LOC_Os03g63270 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63280.1 LOC_Os03g63280 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_175330g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_386090g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_403963g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g06336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo428536 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g094110.4.1 Solyc03g094110 Uncharacterized protein At1g28695 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g074490.4.1 Solyc08g074490 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g24842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018828_P004 Zm00001e018828 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028449_P001 Zm00001e028449 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 143 343
No external refs found!