Msp_g25373


Description : not classified & original description: none


Gene families : OG0005000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25373
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT2G32640 No alias Lycopene beta/epsilon cyclase protein 0.05 OrthoFinder output from all 47 species
Aev_g07877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G032900.1 Ceric.08G032900 not classified & original description: pacid=50638882... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021441.9 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g03750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_08260 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32630.1 LOC_Os08g32630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g38007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo95494 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!