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  5. Msp_g24101

Msp_g24101


Description : subunit gamma of cargo adaptor F-subcomplex & original description: none


Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24101
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.07 OrthoFinder output from all 47 species
Adi_g106385 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aev_g14556 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Ala_g05681 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Aob_g15373 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Ceric.04G110200.1 Ceric.04G110200 subunit gamma of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Dac_g03838 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.11 OrthoFinder output from all 47 species
Dde_g05374 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 OrthoFinder output from all 47 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12590.1 LOC_Os03g12590 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
LOC_Os07g10150.1 LOC_Os07g10150 subunit gamma of cargo adaptor F-subcomplex 0.1 OrthoFinder output from all 47 species
Len_g13320 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02207 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 47 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.1 OrthoFinder output from all 47 species
Ore_g06577 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Pir_g10430 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011888 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 OrthoFinder output from all 47 species
Solyc01g109540.4.1 Solyc01g109540 subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
Spa_g17860 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.1 OrthoFinder output from all 47 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Zm00001e000949_P001 Zm00001e000949 subunit gamma of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e011398_P002 Zm00001e011398 subunit gamma of cargo adaptor F-subcomplex 0.1 OrthoFinder output from all 47 species
Zm00001e033065_P001 Zm00001e033065 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013040 Coatomer_gsu_app_Ig-like_dom 632 776
IPR002553 Clathrin/coatomer_adapt-like_N 31 543
IPR032154 Coatomer_g_Cpla 779 892
No external refs found!