Msp_g23278 (PDR1, ATPDR1)

Aliases : PDR1, ATPDR1

Description : not classified & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g23278
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.03	OrthoFinder output from all 47 species
AT2G29940	ATPDR3, PDR3	pleiotropic drug resistance 3	0.02	OrthoFinder output from all 47 species
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.03	OrthoFinder output from all 47 species
Als_g48617	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g23935	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g37088	PDR11, ATPDR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017202001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017204001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os01g08260.1	PDR4, ATPDR4,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g52560.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g04816	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11416	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g38837	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Smo101338	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo424638	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Zm00001e037233_P001	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	113	189

External Links

No external refs found!

Msp_g23278 (PDR1, ATPDR1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation