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  5. Msp_g22598

Msp_g22598 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g22598

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 OrthoFinder output from all 47 species
AT5G53290 CRF3 cytokinin response factor 3 0.02 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ala_g21684 DEAR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Als_g06158 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07015 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g10151 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g11707 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g32772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39294 tny not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02794.t1 RAP2.11, Aspi01Gene02794 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene34451.t1 Aspi01Gene34451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031184 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1062 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054644 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g06839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18800 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Cba_g24909 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G053400.1 ERF7, ATERF7,... not classified & original description: pacid=50585332... 0.03 OrthoFinder output from all 47 species
Ceric.02G053500.1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G002100.1 Ceric.16G002100 not classified & original description: pacid=50589065... 0.05 OrthoFinder output from all 47 species
Dcu_g00794 ORA47 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10924 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g12477 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dde_g17120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27595 DEAR4, RAP2.10 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dde_g46772 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06062 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01021146001 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01031747001 RRTF1 Alpha-amylase type B isozyme OS=Hordeum vulgare 0.04 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g54050.1 LOC_Os02g54050 Ethylene-responsive transcription factor ERF018... 0.06 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27930.1 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09390.1 RAP2.12, LOC_Os06g09390 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28440.1 RRTF1, LOC_Os09g28440 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.02 OrthoFinder output from all 47 species
Len_g02180 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Len_g08536 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g14523 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10209922g0010 No alias transcription factor (DREB) 0.08 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_10431882g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_18454g0020 ATERF3, ERF3 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_33394g0020 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_426919g0030 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_88g0020 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_9068995g0010 No alias Ethylene-responsive transcription factor ERF016... 0.08 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05560 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09158 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g18978 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19552 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g35440 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g36908 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g31214 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g31928 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002282 No alias subgroup ERF-VI transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g090300.2.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g090770.1.1 ERF110, Solyc02g090770 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc03g093550.1.1 Solyc03g093550 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc06g054630.3.1 Solyc06g054630 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc08g007820.1.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc08g007830.1.1 DDF1, Solyc08g007830 Dehydration-responsive element-binding protein 1F... 0.02 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g04537 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Spa_g16486 RAP2.11 transcription factor *(ERN1) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24172 DEAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46620 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g50570 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51648 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51954 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Tin_g11217 No alias subgroup ERF-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015326_P001 Zm00001e015326 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e016064_P001 RAP2.2, Zm00001e016064 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.04 OrthoFinder output from all 47 species
Zm00001e031783_P001 ERF110, Zm00001e031783 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e041539_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 146 178
No external refs found!