Msp_g20244


Description : not classified & original description: none


Gene families : OG0000977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20244

Target Alias Description ECC score Gene Family Method Actions
AT1G72410 No alias COP1-interacting protein-related 0.02 OrthoFinder output from all 47 species
Adi_g011891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27214 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15330 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g50853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08158 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G092200.1 Ceric.11G092200 not classified & original description: pacid=50596322... 0.04 OrthoFinder output from all 47 species
Ceric.14G089800.1 Ceric.14G089800 not classified & original description: pacid=50634875... 0.06 OrthoFinder output from all 47 species
Ceric.23G038500.1 Ceric.23G038500 not classified & original description: pacid=50611329... 0.03 OrthoFinder output from all 47 species
Dac_g12580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12604 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g23146 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016705001 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_19645 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38631 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39029 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g23798 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g28446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_37764g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020675 No alias not classified & original description: CDS=186-4220 0.02 OrthoFinder output from all 47 species
Sam_g11319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07113 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g15699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47198 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47576 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g48843 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g50180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!