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  5. Msp_g19878

Msp_g19878 (HCT)


Aliases : HCT

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0000246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00256910 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase 0.02 OrthoFinder output from all 47 species
AT5G48930 HCT hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl... 0.03 OrthoFinder output from all 47 species
AT5G57840 No alias HXXXD-type acyl-transferase family protein 0.02 OrthoFinder output from all 47 species
Adi_g118029 HCT EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35222.t1 HCT, Aspi01Gene35222 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z041500.1 HCT, Ceric.1Z041500 EC_2.3 acyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z269900.1 HCT, Ceric.1Z269900 EC_2.3 acyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g22664 HCT EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016053001 HCT Cell wall.lignin.monolignol... 0.02 OrthoFinder output from all 47 species
GSVIVT01023631001 HCT Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
LOC_Os09g37180.1 LOC_Os09g37180 Putrescine hydroxycinnamoyltransferase 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_107125g0010 HCT Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
MA_51326g0010 HCT Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e011305_P001 Zm00001e011305 Agmatine coumaroyltransferase-2 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Zm00001e015083_P002 HCT, Zm00001e015083 hydroxycinnamoyl-CoA:quinate/shikimate... 0.03 OrthoFinder output from all 47 species
Zm00001e022497_P002 HCT, Zm00001e022497 Putrescine hydroxycinnamoyltransferase 1 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Zm00001e030735_P001 Zm00001e030735 Hydroxycinnamoyltransferase 4 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Zm00001e034835_P001 Zm00001e034835 Putrescine hydroxycinnamoyltransferase 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!