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  5. Msp_g19479

Msp_g19479 (FHY2, HY8, PHYA, FRE1)


Aliases : FHY2, HY8, PHYA, FRE1

Description : phytochrome photoreceptor *(PHY) & original description: none


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19479

Target Alias Description ECC score Gene Family Method Actions
Adi_g013003 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16495 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33149 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02397 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0234.g059451 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description:... 0.03 OrthoFinder output from all 47 species
Len_g12690 HY3, OOP1, PHYB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07013 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016463 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g059870.4.1 HY3, OOP1, PHYB,... phytochrome photoreceptor (PHY). temperature sensor... 0.02 OrthoFinder output from all 47 species
Solyc07g045480.3.1 PHYC, Solyc07g045480 phytochrome photoreceptor (PHY) 0.03 OrthoFinder output from all 47 species
Spa_g14459 FHY2, HY8, PHYA, FRE1 phytochrome photoreceptor *(PHY) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20479 HY3, OOP1, PHYB temperature sensor protein *(PHY-B) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045765 regulation of angiogenesis IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901342 regulation of vasculature development IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
InterPro domains Description Start Stop
IPR013767 PAS_fold 1 76
IPR013767 PAS_fold 92 214
IPR003661 HisK_dim/P 240 298
IPR003594 HATPase_C 348 459
No external refs found!