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  5. Msp_g19025

Msp_g19025 (AtTRM82, TRM82)


Aliases : AtTRM82, TRM82

Description : component *(TRM82) of TRM8-TRM82 tRNA guanosine-methyltransferase complex & original description: none


Gene families : OG0004680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19025
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Nbi_g29349 AtTRM82, TRM82 component *(TRM82) of TRM8-TRM82 tRNA... 0.02 OrthoFinder output from all 47 species
Ore_g25918 AtTRM82, TRM82 component *(TRM82) of TRM8-TRM82 tRNA... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 192 224
IPR001680 WD40_repeat 143 172
IPR001680 WD40_repeat 54 87
No external refs found!