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  5. Msp_g17285

Msp_g17285


Description : not classified & original description: none


Gene families : OG0009838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17285

Target Alias Description ECC score Gene Family Method Actions
Adi_g069144 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37578 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g43193 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02160 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14525 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20087 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g23909 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g32998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 123
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 254 276
IPR002885 Pentatricopeptide_repeat 152 177
No external refs found!