Aliases : ATRNL, AtRLG1, RNL
Description : multifunctional tRNA ligase *(RLG1) & original description: none
Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_107545g0010 | ATRNL, AtRLG1, RNL | tRNA ligase 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003972 | RNA ligase (ATP) activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR015965 | tRNA_lig_PDEase | 898 | 1041 |
No external refs found! |