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  5. Msp_g16033

Msp_g16033 (SIP2, AtSIP2)


Aliases : SIP2, AtSIP2

Description : not classified & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g16033
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00156250 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
Aev_g21107 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37879 SIP2, AtSIP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38472 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g25747 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42441 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005620001 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.02 OrthoFinder output from all 47 species
GSVIVT01014778001 AtSIP1, SIP1 Probable galactinol--sucrose galactosyltransferase 1... 0.02 OrthoFinder output from all 47 species
Gb_07183 AtSTS, STS stachyose synthase 0.03 OrthoFinder output from all 47 species
LOC_Os07g10840.1 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.02 OrthoFinder output from all 47 species
Lfl_g09706 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434712g0010 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
MA_10436532g0010 SIP1 stachyose synthase 0.01 OrthoFinder output from all 47 species
Msp_g05372 SIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30549 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33650 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g079300.4.1 AtSTS, STS,... stachyose synthase 0.03 OrthoFinder output from all 47 species
Solyc02g086530.4.1 SIP1, Solyc02g086530 raffinose synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 7 755
No external refs found!