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  5. Msp_g15914

Msp_g15914 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15914

Target Alias Description ECC score Gene Family Method Actions
Dcu_g13050 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 574 608
IPR001313 Pumilio_RNA-bd_rpt 721 754
IPR001313 Pumilio_RNA-bd_rpt 610 641
IPR001313 Pumilio_RNA-bd_rpt 759 776
IPR001313 Pumilio_RNA-bd_rpt 686 716
IPR001313 Pumilio_RNA-bd_rpt 793 827
IPR001313 Pumilio_RNA-bd_rpt 648 675
No external refs found!