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  5. Msp_g15669

Msp_g15669


Description : SSU processome assembly factor *(UTP4/PCN) & original description: none


Gene families : OG0005021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15669
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00140150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT4G07410 No alias Transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre13.g606850 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01009321001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52470.1 LOC_Os03g52470 SSU processome assembly factor (UTP4/PCN) 0.04 OrthoFinder output from all 47 species
Len_g29124 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.03 OrthoFinder output from all 47 species
Ore_g36314 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.07 OrthoFinder output from all 47 species
Tin_g01242 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e005587_P002 Zm00001e005587 SSU processome assembly factor (UTP4/PCN) 0.03 OrthoFinder output from all 47 species
Zm00001e012090_P001 Zm00001e012090 SSU processome assembly factor (UTP4/PCN) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 201 227
No external refs found!