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  5. Msp_g15610

Msp_g15610


Description : not classified & original description: none


Gene families : OG0002555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15610
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0493.g073550 No alias not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
Ehy_g20637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432999g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e001363_P003 Zm00001e001363 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027294_P001 Zm00001e027294 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR021369 DUF2985 124 202
IPR006461 PLAC_motif_containing 344 474
No external refs found!