Aliases : RSH1, ATRSH1, AT-RSH1
Description : ppGpp hydrolase *(RSH1) & original description: none
Gene families : OG0007704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007704_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g15202 | |
Cluster | HCCA: Cluster_46 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G02260 | RSH1, ATRSH1, AT-RSH1 | RELA/SPOT homolog 1 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g000749 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g01958 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07422 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13069 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Cba_g03393 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.08G066100.1 | RSH1, ATRSH1,... | ppGpp hydrolase *(RSH1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020961.58 | RSH1, ATRSH1, AT-RSH1 | Putative GTP diphosphokinase RSH1, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g23400 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g22160.1 | RSH1, ATRSH1,... | Putative GTP diphosphokinase RSH1, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
Len_g17577 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g03474 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp6g07090.1 | RSH1, ATRSH1, AT-RSH1 | Putative GTP diphosphokinase RSH1, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g01441 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ore_g41028 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g12213 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03956 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sam_g19490 | No alias | ppGpp hydrolase *(RSH1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g075390.4.1 | RSH1, ATRSH1,... | Putative GTP diphosphokinase RSH1, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g098580.3.1 | RSH1, ATRSH1,... | Putative GTP diphosphokinase RSH1, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12236 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Tin_g28376 | RSH1, ATRSH1, AT-RSH1 | ppGpp hydrolase *(RSH1) & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |