1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g14904

Msp_g14904


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14904
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Adi_g018230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16418 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21372 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19265 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014220 No alias not classified & original description: CDS=1-2523 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042638 No alias not classified & original description: CDS=1-2115 0.05 OrthoFinder output from all 47 species
Azfi_s0096.g043691 No alias not classified & original description: CDS=1-1776 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0144.g051561 No alias not classified & original description: CDS=1-3123 0.05 OrthoFinder output from all 47 species
Azfi_s0154.g053516 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Azfi_s0229.g059123 No alias not classified & original description: CDS=1-2415 0.04 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.04 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.04 OrthoFinder output from all 47 species
Ceric.10G031100.1 Ceric.10G031100 not classified & original description: pacid=50612341... 0.03 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.03 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.05 OrthoFinder output from all 47 species
Ceric.23G005700.1 Ceric.23G005700 not classified & original description: pacid=50611427... 0.03 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.35G011900.1 Ceric.35G011900 not classified & original description: pacid=50581676... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16778 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003855 No alias not classified & original description: CDS=1-1500 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016316 No alias not classified & original description: CDS=1-1953 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022524 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 185
IPR002885 Pentatricopeptide_repeat 419 447
IPR002885 Pentatricopeptide_repeat 49 69
IPR002885 Pentatricopeptide_repeat 77 107
IPR002885 Pentatricopeptide_repeat 194 224
IPR002885 Pentatricopeptide_repeat 518 565
IPR002885 Pentatricopeptide_repeat 300 347
No external refs found!