Msp_g14858


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14858

Target Alias Description ECC score Gene Family Method Actions
AT5G35753 No alias Domain of unknown function (DUF3444) 0.01 OrthoFinder output from all 47 species
Adi_g128730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15554 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g35313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28270.t1 Aspi01Gene28270 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60872.t1 Aspi01Gene60872 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67595.t1 Aspi01Gene67595 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0011.g012737 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035072 No alias not classified & original description: CDS=1-1533 0.04 OrthoFinder output from all 47 species
Len_g29277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434613g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_137848g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g13928 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g38502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002269 No alias not classified & original description: CDS=18-2435 0.01 OrthoFinder output from all 47 species
Spa_g20600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 554 757
IPR001623 DnaJ_domain 67 128
No external refs found!