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  5. Msp_g14741

Msp_g14741


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g14741

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00204p00028740 evm_27.TU.AmTr_v1... Filament-like plant protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g087236 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23963 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008864001 No alias Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
GSVIVT01008865001 No alias Filament-like plant protein (Fragment) OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
LOC_Os10g07480.1 LOC_Os10g07480 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g14363 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_3317g0010 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g19189 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30136 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009503 No alias not classified & original description: CDS=366-3284 0.02 OrthoFinder output from all 47 species
Solyc04g081260.3.1 Solyc04g081260 Filament-like plant protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 81 1036
No external refs found!