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Description : component *(ADA3) of SAGA transcription co-activator complex & original description: none
Gene families : OG0002109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g14668 | |
| Cluster | HCCA: Cluster_164 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00031p00010980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05137 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29245 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49584 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10990 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10991 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21813 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.03G067900.1 | Ceric.03G067900 | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G015100.1 | Ceric.34G015100 | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g46147 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12120 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015158001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_07255 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30047 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g73620.1 | LOC_Os01g73620 | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g01690.1 | LOC_Os05g01690 | component ADA3 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g28300.1 | LOC_Os05g28300 | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10698 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10282 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g27993 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| MA_107341g0010 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g06630.1 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g18247 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.12 | OrthoFinder output from all 47 species | |
| Pir_g13632 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48948 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Smo407119 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc07g040980.3.1 | Solyc07g040980 | component ADA3 of SAGA transcription co-activator complex | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g006960.2.1 | Solyc11g006960 | component ADA3 of SAGA transcription co-activator complex | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g26204 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e018678_P002 | Zm00001e018678 | component ADA3 of SAGA transcription co-activator complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027665_P001 | Zm00001e027665 | component ADA3 of SAGA transcription co-activator complex | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e029688_P001 | Zm00001e029688 | component ADA3 of SAGA transcription co-activator complex | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019340 | Histone_AcTrfase_su3 | 972 | 1056 |
| No external refs found! |