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  5. Msp_g13978

Msp_g13978


Description : not classified & original description: none


Gene families : OG0007635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007635_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13978

Target Alias Description ECC score Gene Family Method Actions
Cba_g02114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G021900.1 Ceric.05G021900 not classified & original description: pacid=50577979... 0.07 OrthoFinder output from all 47 species
Dac_g09429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034473001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_32188 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g13746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g065360.3.1 Solyc06g065360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 1161 1188
IPR019734 TPR_repeat 823 851
No external refs found!