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  5. Msp_g13667

Msp_g13667 (EMB2016)


Aliases : EMB2016

Description : regulatory component *(VIR) of adenosine N6-methyltransferase complex & original description: none


Gene families : OG0007626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13667
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00079350 EMB2016,... RNA processing.RNA modification.mRNA... 0.05 OrthoFinder output from all 47 species
AT3G05680 EMB2016 embryo defective 2016 0.08 OrthoFinder output from all 47 species
Adi_g117188 EMB2016 regulatory component *(VIR) of adenosine... 0.04 OrthoFinder output from all 47 species
Ala_g07640 EMB2016 regulatory component *(VIR) of adenosine... 0.05 OrthoFinder output from all 47 species
Als_g16425 EMB2016 regulatory component *(VIR) of adenosine... 0.04 OrthoFinder output from all 47 species
Aob_g21900 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Aop_g09034 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70942.t1 EMB2016, Aspi01Gene70942 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12918 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Dcu_g34300 EMB2016 regulatory component *(VIR) of adenosine... 0.06 OrthoFinder output from all 47 species
GSVIVT01020162001 EMB2016 RNA processing.RNA modification.mRNA... 0.06 OrthoFinder output from all 47 species
Gb_24781 EMB2016 regulatory component VIR of adenosine... 0.03 OrthoFinder output from all 47 species
LOC_Os03g35340.1 EMB2016, LOC_Os03g35340 regulatory component VIR of adenosine... 0.05 OrthoFinder output from all 47 species
Lfl_g12938 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
MA_10427076g0010 EMB2016 no description available(sp|f4j8g7|vir_arath : 177.0) 0.03 OrthoFinder output from all 47 species
MA_5836g0010 EMB2016 regulatory component VIR of adenosine... 0.04 OrthoFinder output from all 47 species
Ore_g19695 EMB2016 regulatory component *(VIR) of adenosine... 0.05 OrthoFinder output from all 47 species
Pir_g16072 EMB2016 regulatory component *(VIR) of adenosine... 0.05 OrthoFinder output from all 47 species
Ppi_g08793 EMB2016 regulatory component *(VIR) of adenosine... 0.05 OrthoFinder output from all 47 species
Solyc03g020020.3.1 EMB2016, Solyc03g020020 regulatory component VIR of adenosine... 0.05 OrthoFinder output from all 47 species
Zm00001e012524_P001 EMB2016, Zm00001e012524 regulatory component VIR of adenosine... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!