Msp_g13560


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00134970 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00010p00189870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00180200 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00111p00120840 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G02110 No alias Protein of unknown function (DUF630 and DUF632) 0.02 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.05 OrthoFinder output from all 47 species
AT3G51290 No alias Protein of unknown function (DUF630) ;Protein of unknown... 0.04 OrthoFinder output from all 47 species
AT4G30130 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
AT5G25590 No alias Protein of unknown function (DUF630 and DUF632) 0.03 OrthoFinder output from all 47 species
Ala_g06649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65197.t1 Aspi01Gene65197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038449 No alias not classified & original description: CDS=121-2259 0.03 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.12 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.07 OrthoFinder output from all 47 species
Ceric.21G041700.1 Ceric.21G041700 not classified & original description: pacid=50603626... 0.09 OrthoFinder output from all 47 species
Ceric.24G009600.1 Ceric.24G009600 not classified & original description: pacid=50628679... 0.03 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.1 OrthoFinder output from all 47 species
Ceric.38G005900.1 Ceric.38G005900 not classified & original description: pacid=50579413... 0.03 OrthoFinder output from all 47 species
Dac_g02345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004516001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01022363001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035712001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_04769 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33037 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g07980.1 LOC_Os05g07980 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g16640.1 LOC_Os05g16640 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g32760.1 LOC_Os05g32760 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os09g20340.1 LOC_Os09g20340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g37040.1 LOC_Os09g37040 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g03363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426522g0020 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g01272 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g34525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000836 No alias not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001002 No alias not classified & original description: CDS=529-2772 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336 No alias not classified & original description: CDS=1-2424 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024846 No alias not classified & original description: CDS=1-2247 0.05 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo145899 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g111740.3.1 Solyc01g111740 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g083610.4.1 Solyc02g083610 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g054880.3.1 Solyc04g054880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g068100.3.1 Solyc08g068100 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g12290 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06659 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002360_P001 Zm00001e002360 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e015309_P001 Zm00001e015309 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e021207_P003 Zm00001e021207 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e021917_P001 Zm00001e021917 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027205_P001 Zm00001e027205 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035991_P001 Zm00001e035991 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e037852_P002 Zm00001e037852 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 259 565
IPR006868 DUF630 1 59
No external refs found!