Msp_g13439

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none

Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g13439

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene49467.t1	Aspi01Gene49467	large subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
MA_96898g0010	ATU2AF65A	large subunit of U2AF pre-RNA splicing auxiliary factor complex	0.02	OrthoFinder output from all 47 species
Ppi_g06381	No alias	large subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
Spa_g15594	No alias	large subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	345	405
IPR000504	RRM_dom	187	256
IPR000504	RRM_dom	67	141

External Links

No external refs found!