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  5. Msp_g13265

Msp_g13265


Description : not classified & original description: none


Gene families : OG0002203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13265
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Aev_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G026000.1 Ceric.06G026000 not classified & original description: pacid=50619946... 0.05 OrthoFinder output from all 47 species
Ceric.11G056800.1 Ceric.11G056800 not classified & original description: pacid=50596860... 0.03 OrthoFinder output from all 47 species
Dac_g06685 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g17409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005656_P001 ATSUV3, EDA15,... ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e007912_P001 Zm00001e007912 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041082 Suv3_C_1 661 703
IPR001650 Helicase_C 473 579
IPR022192 SUV3_C 725 771
No external refs found!