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  5. Msp_g13086

Msp_g13086


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g13086

Target Alias Description ECC score Gene Family Method Actions
AT1G16060 ADAP ARIA-interacting double AP2 domain protein 0.04 OrthoFinder output from all 47 species
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Cba_g32303 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G056200.1 PLT2, Ceric.10G056200 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G003300.1 PLT2, Ceric.26G003300 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g009650 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
Len_g08830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_31722g0010 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Pir_g37090 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.05 OrthoFinder output from all 47 species
Pir_g37453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g59880 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008088 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g064960.3.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.06 OrthoFinder output from all 47 species
Solyc03g044300.3.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Tin_g34262 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e024044_P002 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e032754_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 174
IPR001471 AP2/ERF_dom 217 268
No external refs found!