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  5. Msp_g12599

Msp_g12599


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12599
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g06660 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23705 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47265 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05634 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33723.t1 Aspi01Gene33723 transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40313.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023545 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048483 No alias transcription factor *(CLAUSA) & original description: CDS=1-1350 0.03 OrthoFinder output from all 47 species
Cba_g09039 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44014 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00938 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03380 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g21240.1 PHL1, LOC_Os03g21240 PHR1 transcription factor involved in proline synthesis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48596.1 LOC_Os07g48596 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.05 OrthoFinder output from all 47 species
MA_21538g0020 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_8865g0010 KAN2 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g13479 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44093 KAN4, ATS transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12454 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05070 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006600 KAN4, ATS KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007773 PHL1 not classified & original description: CDS=638-1480 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.03 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Solyc10g080460.2.1 Solyc10g080460 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g19684 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003093_P001 KAN4, ATS, Zm00001e003093 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e006632_P003 Zm00001e006632 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e009294_P001 Zm00001e009294 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 65 115
No external refs found!