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  5. Msp_g12537

Msp_g12537 (CRF4)


Aliases : CRF4

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12537

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g001941 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g039127 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054332 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g03105 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.06 OrthoFinder output from all 47 species
Aev_g46572 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01417 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g21684 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36562 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g38509 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51788 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13161 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22160 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aob_g22889 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g07384 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12983 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g70736 DREB26 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene00047.t1 TINY2, Aspi01Gene00047 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05425.t1 ORA47, Aspi01Gene05425 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06525.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08499.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21088.t1 Aspi01Gene21088 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24390.t1 RAP2.1, Aspi01Gene24390 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24392.t1 RAP2.1, Aspi01Gene24392 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25863.t1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69424.t1 Aspi01Gene69424 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g11441 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g33790 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G021800.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G042900.1 DEAR2, Ceric.24G042900 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g08898 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16085 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g20126 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11833 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g12115 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g27325 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ehy_g30923 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_01212 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_12965 ERF110 Ethylene-responsive transcription factor ABR1... 0.02 OrthoFinder output from all 47 species
Gb_26739 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26857 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26858 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_29220 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_29359 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46440.1 ERF38, ATERF38,... transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.03 OrthoFinder output from all 47 species
LOC_Os08g31580.1 RAP2.4, LOC_Os08g31580 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20350.1 RAP2.4, LOC_Os09g20350 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g07511 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13962 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g15165 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22270 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Lfl_g04058 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06071 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Lfl_g28894 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39388 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40989 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_198113g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_27642g0010 PUCHI transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_3405g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_8552524g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04002 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09486 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18180 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g19264 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g10578 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g28319 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g04273 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g09341 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g18808 DEAR4, RAP2.10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g49340 DREB2B, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g51435 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60485 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32668 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g05046 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g33101 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g41606 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ppi_g56408 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g33704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g090300.2.1 ATERF13, ERF13,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc02g077370.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g04379 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g05270 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17335 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g22026 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35497 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g46620 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g48877 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g03837 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e033541_P001 Zm00001e033541 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 153 202
No external refs found!