Msp_g12143 (CLPS3)

Aliases : CLPS3

Description : component *(Clp1) of Cleavage Factor II (CF-IIm) complex & original description: none

Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g12143

Target	Alias	Description	ECC score	Gene Family Method
Adi_g040962	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Adi_g063486	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Als_g09438	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.04	OrthoFinder output from all 47 species
Aob_g05110	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.06	OrthoFinder output from all 47 species
Aop_g14157	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Aop_g22381	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.01	OrthoFinder output from all 47 species
Aspi01Gene27178.t2	CLPS3, Aspi01Gene27178	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene34271.t1	CLPS3, Aspi01Gene34271	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Cba_g12558	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Ceric.38G063700.1	CLPS3, Ceric.38G063700	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Dac_g02159	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Dcu_g03837	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.06	OrthoFinder output from all 47 species
Dcu_g13963	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Dde_g25534	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Ehy_g17586	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01032607001	CLPS3	RNA processing.RNA 3-end polyadenylation.Cleavage Factor...	0.02	OrthoFinder output from all 47 species
Len_g14699	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Lfl_g10185	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.01	OrthoFinder output from all 47 species
Lfl_g34227	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Pir_g09435	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.01	OrthoFinder output from all 47 species
Pir_g49903	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Pnu_g13964	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017406	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.02	OrthoFinder output from all 47 species
Sam_g15976	No alias	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.01	OrthoFinder output from all 47 species
Solyc01g009290.4.1	CLPS3, Solyc01g009290	component Clp1 of Cleavage Factor II (CF-IIm) complex	0.03	OrthoFinder output from all 47 species
Spa_g12055	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.03	OrthoFinder output from all 47 species
Tin_g01837	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.01	OrthoFinder output from all 47 species
Tin_g44755	CLPS3	component *(Clp1) of Cleavage Factor II (CF-IIm) complex...	0.04	OrthoFinder output from all 47 species
Zm00001e024954_P001	CLPS3, Zm00001e024954	component Clp1 of Cleavage Factor II (CF-IIm) complex	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0031123	RNA 3'-end processing	None	Extended
BP	GO:0031124	mRNA 3'-end processing	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032319	CLP1_P	121	309
IPR010655	Clp1_C	315	411
IPR032324	Clp1_N	5	96

External Links

No external refs found!

Msp_g12143 (CLPS3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation