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  5. Msp_g12103

Msp_g12103


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12103
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00095120 ERF110,... Ethylene-responsive transcription factor ERF110... 0.02 OrthoFinder output from all 47 species
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 OrthoFinder output from all 47 species
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.03 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g056044 ERF110 subgroup ERF-X transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g081431 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g119481 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g01005 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g25693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10286 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g36600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46495 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48035 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50260 DEAR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03305 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g07731 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g21513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35811 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g12983 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aop_g18122 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g60181 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09185.t1 RAP2.2, Aspi01Gene09185 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g78270 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.10G058000.1 ORA47, Ceric.10G058000 not classified & original description: pacid=50613486... 0.03 OrthoFinder output from all 47 species
Dac_g23065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38876 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Dcu_g04596 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14322 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011465001 RAP2.11 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os07g47330.1 PUCHI, LOC_Os07g47330 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g01080 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g13558 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Lfl_g13705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_132427g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.04 OrthoFinder output from all 47 species
MA_65877g0010 No alias Dehydration-responsive element-binding protein 3... 0.03 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Ore_g10578 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g15422 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g31608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37668 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g44016 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12670 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Pnu_g22702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24749 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g008350.3.1 TINY2, Solyc12g008350 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g16012 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g30191 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 113 160
No external refs found!