Msp_g11830


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00175630 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g09900... 0.04 OrthoFinder output from all 47 species
AMTR_s00074p00175650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g62910... 0.04 OrthoFinder output from all 47 species
Adi_g003355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18028 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.05 OrthoFinder output from all 47 species
Len_g14840 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g24294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36891 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g39172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.04 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.05 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo107819 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.03 OrthoFinder output from all 47 species
Smo74408 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.05 OrthoFinder output from all 47 species
Smo94312 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 114
IPR002885 Pentatricopeptide_repeat 8 56
No external refs found!