- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0001461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001461_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g11726 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00209p00027350 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT1G31130 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g015435 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g36070 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14026 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10525 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene38463.t1 | Aspi01Gene38463 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g17312 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.09G017600.1 | Ceric.09G017600 | not classified & original description: pacid=50586735... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.09G018300.1 | Ceric.09G018300 | not classified & original description: pacid=50587839... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15192 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08640 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08591 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g00748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009991001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Gb_17606 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g58620.1 | LOC_Os01g58620 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g01590.1 | LOC_Os08g01590 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g17492 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g01407 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g21279 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431424g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_6995327g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8215665g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_82205g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g08740.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g31110 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12697 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g064530.1.1 | Solyc04g064530 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15369 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
| BP | GO:0010167 | response to nitrate | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0015706 | nitrate transmembrane transport | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098661 | inorganic anion transmembrane transport | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901698 | response to nitrogen compound | IEP | HCCA |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
| BP | GO:1902025 | nitrate import | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |