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  5. Msp_g11072

Msp_g11072


Description : not classified & original description: none


Gene families : OG0002295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11072
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00238080 AtRLP4, RLP4,... Receptor-like protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G25570 No alias Di-glucose binding protein with Leucine-rich repeat domain 0.02 OrthoFinder output from all 47 species
AT1G28340 AtRLP4, RLP4 receptor like protein 4 0.02 OrthoFinder output from all 47 species
Adi_g023164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26688 AtRLP4, RLP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0014.g013670 No alias not classified & original description: CDS=281-2188 0.03 OrthoFinder output from all 47 species
Ceric.03G054100.1 Ceric.03G054100 not classified & original description: pacid=50571324... 0.03 OrthoFinder output from all 47 species
Dac_g12834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g04720.1 LOC_Os01g04720 Receptor-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g04327 AtRLP4, RLP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g07230.1 No alias Receptor-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g02285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004220 No alias not classified & original description: CDS=1-1839 0.03 OrthoFinder output from all 47 species
Spa_g33389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 375 415
IPR024788 Malectin-like_Carb-bd_dom 34 365
IPR001611 Leu-rich_rpt 424 482
No external refs found!