Msp_g11019 (ATPUB45, PUB45)

Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g11019

Target	Alias	Description	ECC score	Gene Family Method
AT1G27910	ATPUB45, PUB45	plant U-box 45	0.03	OrthoFinder output from all 47 species
Ceric.08G047000.1	ATPUB45, PUB45,...	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g07545	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01010374001	No alias	U-box domain-containing protein 6 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Lfl_g04138	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g10053	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g33424	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g10644	ATPUB45, PUB45	E3 ubiquiTin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007747_P003	ATPUB45, PUB45,...	U-box domain-containing protein 6 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e018944_P001	ATPUB45, PUB45,...	U-box domain-containing protein 45 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e041111_P003	ATPUB45, PUB45,...	U-box domain-containing protein 7 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	285	355

External Links

No external refs found!