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  5. Msp_g10936

Msp_g10936 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10936
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Adi_g020848 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08486 AMY1, ATAMY1 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13965.t1 AMY3, ATAMY3,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38425.t1 AMY2, ATAMY2,... alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22213 AMY1, ATAMY1 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G070100.1 AMY1, ATAMY1,... alpha amylase & original description: pacid=50600969... 0.04 OrthoFinder output from all 47 species
Cre08.g384750 AMY2, ATAMY2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Dac_g11521 AMY1, ATAMY1 alpha amylase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12959 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00848 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20513 AMY3, ATAMY3 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32723 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo97625 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Spa_g37719 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 137 427
IPR012850 A-amylase_bs_C 448 508
No external refs found!