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  5. Msp_g10266

Msp_g10266 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.05 OrthoFinder output from all 47 species
AMTR_s00103p00119740 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.02 OrthoFinder output from all 47 species
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 OrthoFinder output from all 47 species
Adi_g081976 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aev_g00913 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ala_g13018 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g02333 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Als_g28568 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Aop_g20584 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.09G096900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Ceric.11G031700.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Cre13.g588550 SYP132, ATSYP132 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Dcu_g04463 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Dcu_g19765 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ehy_g01238 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Gb_16444 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
LOC_Os03g52650.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Len_g18253 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Lfl_g03028 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Lfl_g05313 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
MA_28961g0010 SYP125, ATSYP125 SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Mp2g19600.1 SYP132, ATSYP132 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Msp_g12979 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g09931 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g17925 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g26913 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g04642 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g11139 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012994 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025773 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Smo151097 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Spa_g10959 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Spa_g18662 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Spa_g48264 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g03937 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g28381 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.09 OrthoFinder output from all 47 species
Tin_g28595 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Tin_g31514 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.08 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Zm00001e011907_P001 SYP121,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012082_P001 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 241 288
IPR006011 Syntaxin_N 34 236
No external refs found!