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  5. Msp_g10133

Msp_g10133


Description : myosin adaptor protein *(MadA) & original description: none


Gene families : OG0001542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10133
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00204600 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.13 OrthoFinder output from all 47 species
AMTR_s00077p00164670 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
AT4G02800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.15 OrthoFinder output from all 47 species
Adi_g011385 No alias myosin adaptor protein *(MadA) & original description: none 0.11 OrthoFinder output from all 47 species
Aev_g18548 No alias myosin adaptor protein *(MadA) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g24360 No alias myosin adaptor protein *(MadA) & original description: none 0.13 OrthoFinder output from all 47 species
Als_g03462 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16451 No alias myosin adaptor protein *(MadA) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g16106 No alias myosin adaptor protein *(MadA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12834 No alias myosin adaptor protein *(MadA) & original description: none 0.15 OrthoFinder output from all 47 species
Aspi01Gene18486.t1 Aspi01Gene18486 myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene49282.t1 Aspi01Gene49282 myosin adaptor protein *(MadA) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000355 No alias myosin adaptor protein *(MadA) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.27G044700.1 Ceric.27G044700 myosin adaptor protein *(MadA) & original description:... 0.18 OrthoFinder output from all 47 species
Dcu_g04515 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06833 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011083001 No alias Cytoskeleton.microfilament network.myosin... 0.13 OrthoFinder output from all 47 species
Gb_02819 No alias myosin adaptor protein (MadA) 0.08 OrthoFinder output from all 47 species
LOC_Os04g15800.1 LOC_Os04g15800 myosin adaptor protein (MadA) 0.14 OrthoFinder output from all 47 species
Len_g40909 No alias myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
MA_84757g0010 No alias myosin adaptor protein (MadA) 0.11 OrthoFinder output from all 47 species
Nbi_g25656 No alias myosin adaptor protein *(MadA) & original description: none 0.24 OrthoFinder output from all 47 species
Ppi_g57849 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14885 No alias myosin adaptor protein *(MadA) & original description: none 0.08 OrthoFinder output from all 47 species
Solyc06g008980.3.1 Solyc06g008980 myosin adaptor protein (MadA) 0.1 OrthoFinder output from all 47 species
Solyc10g074800.3.1 Solyc10g074800 myosin adaptor protein (MadA) 0.03 OrthoFinder output from all 47 species
Spa_g08764 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008503_P002 Zm00001e008503 myosin adaptor protein (MadA) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!