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  5. Msp_g10078

Msp_g10078


Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10078
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT4G15980 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
Adi_g009732 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043013 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G021900.1 Ceric.34G021900 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02809 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21034.1 ATPME3, PME3,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g65790.1 LOC_Os01g65790 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os07g49100.1 LOC_Os07g49100 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os08g34910.1 LOC_Os08g34910 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g13298 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g099940.3.1 Solyc01g099940 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc06g009190.4.1 Solyc06g009190 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc06g034360.2.1 Solyc06g034360 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g017560.4.1 Solyc07g017560 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g017600.3.1 PME44, ATPME44,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e009863_P001 Zm00001e009863 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e034231_P001 Zm00001e034231 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e035932_P003 Zm00001e035932 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e041006_P001 Zm00001e041006 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 348 645
IPR006501 Pectinesterase_inhib_dom 49 205
No external refs found!