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Msp_g10012


Description : subunit alpha of co-translational insertion system Sec61 subcomplex & original description: none


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10012

Target Alias Description ECC score Gene Family Method Actions
Ala_g34265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g32463 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Dac_g04650 No alias subunit alpha of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
LOC_Os09g33720.1 LOC_Os09g33720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 46 80
IPR002208 SecY/SEC61-alpha 81 464
No external refs found!